Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transfer protein | SAMEA3472147_04590 | Not Available | Negative | 4685079 - 4685390 | 11938.8 |
| pilin precursor | SAMEA3472147_04591 | Not Available | Negative | 4685405 - 4685770 | 12746.3 |
| conjugal transfer protein tray | SAMEA3472147_04592 | Not Available | Negative | 4685803 - 4686198 | 15210.3 |
| conjugal transfer transcriptional regulator traj | SAMEA3472147_04593 | Not Available | Negative | 4686297 - 4686986 | 27051.2 |
| conjugal transfer protein tram | SAMEA3472147_04594 | Not Available | Negative | 4687173 - 4687556 | 14529.4 |
| putative transglycosylase | SAMEA3472147_04595 | Not Available | Positive | 4687970 - 4688479 | 19195.1 |
| yubp | SAMEA3472147_04596 | Not Available | Negative | 4688775 - 4689035 | 10164.1 |
| yubp | SAMEA3472147_04597 | Not Available | Negative | 4689035 - 4689595 | 21465.7 |
| uncharacterised protein | SAMEA3472147_04598 | Not Available | Negative | 4689706 - 4690002 | 11062.2 |
| uncharacterised protein | SAMEA3472147_04600 | Not Available | Negative | 4691270 - 4691617 | 13108.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





