Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin synthetase | SAMEA3472147_04570 | Not Available | Negative | 4668288 - 4669328 | 38650.3 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | SAMEA3472147_04571 | Not Available | Positive | 4669415 - 4670704 | 47329.4 |
| putative phosphatidylethanolamine-binding protein | SAMEA3472147_04572 | Not Available | Positive | 4670763 - 4671239 | 17072.0 |
| acyl-coa thioester hydrolase | SAMEA3472147_04573 | Not Available | Positive | 4671391 - 4672674 | 46015.6 |
| putative aconitase | SAMEA3472147_04574 | Not Available | Negative | 4672815 - 4674926 | 75971.7 |
| conjugal transfer protein traw | SAMEA3472147_04575 | Not Available | Negative | 4675444 - 4676076 | 23545.6 |
| conjugative transfer protein | SAMEA3472147_04576 | Not Available | Negative | 4676073 - 4676459 | 14294.2 |
| conjugal transfer atp-binding protein trac | SAMEA3472147_04577 | Not Available | Negative | 4676456 - 4679086 | 99388.5 |
| uncharacterised protein | SAMEA3472147_04578 | Not Available | Negative | 4679213 - 4679560 | 13341.2 |
| uncharacterised protein | SAMEA3472147_04579 | Not Available | Negative | 4679588 - 4679806 | 7709.31 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





