Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase | SAMEA3472147_00103 | Not Available | Negative | 104310 - 105188 | 31285.9 |
| glycine cleavage system transcriptional repressor | SAMEA3472147_00104 | Not Available | Positive | 105334 - 105906 | 20799.9 |
| thioredoxin-dependent thiol peroxidase | SAMEA3472147_00105 | Not Available | Positive | 105906 - 106376 | 17619.9 |
| hydrogenase 4 fe-s subunit | SAMEA3472147_00106 | Not Available | Positive | 106629 - 107246 | 22203.6 |
| hydrogenase-4 component b | SAMEA3472147_00107 | Not Available | Positive | 107246 - 109264 | 72620.5 |
| hydrogenase 4, membrane subunit | SAMEA3472147_00108 | Not Available | Positive | 109275 - 110222 | 34283.2 |
| hydrogenase 4 subunit d | SAMEA3472147_00109 | Not Available | Positive | 110239 - 110988 | 27497.8 |
| hydrogenase 4 subunit d | SAMEA3472147_00110 | Not Available | Positive | 110937 - 111677 | 26546.5 |
| hydrogenase-4 component e | SAMEA3472147_00111 | Not Available | Positive | 111689 - 112339 | 23332.9 |
| hydrogenase 4, membrane subunit hyff | SAMEA3472147_00112 | Not Available | Positive | 112344 - 113924 | 56658.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





