Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane protein | SAMEA3472147_04547 | Not Available | Positive | 4647478 - 4648137 | 22198.6 |
| 2-ketoaldonate reductase/glyoxylate reductase b | SAMEA3472147_04548 | Not Available | Positive | 4648241 - 4649215 | 35398.5 |
| putative lipoprotein | SAMEA3472147_04549 | Not Available | Negative | 4649265 - 4649975 | 25664.5 |
| putative transcriptional regulator | SAMEA3472147_04550 | Not Available | Positive | 4650409 - 4650699 | 11033.5 |
| glycine-trna synthetase, beta subunit | SAMEA3472147_04553 | Not Available | Negative | 4651855 - 4653924 | 76817.2 |
| glycine trna synthetase | SAMEA3472147_04554 | Not Available | Negative | 4653934 - 4654845 | 34718.2 |
| putative lipoprotein | SAMEA3472147_04555 | Not Available | Negative | 4654940 - 4655239 | 11340.8 |
| putative membrane-associated acyltransferase | SAMEA3472147_04556 | Not Available | Positive | 4655414 - 4656409 | 37674.1 |
| inner membrane protein yiaa | SAMEA3472147_04557 | Not Available | Negative | 4656451 - 4656888 | 16123.6 |
| membrane protein ybhm | SAMEA3472147_04558 | Not Available | Negative | 4657253 - 4657882 | 22689.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





