Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf1380) | SAMEA3472147_04515 | Not Available | Negative | 4620901 - 4621335 | 16004.0 |
| putative cytoplasmic protein | SAMEA3472147_04516 | Not Available | Negative | 4621349 - 4621570 | 8675.34 |
| dna methylase | SAMEA3472147_04517 | Not Available | Negative | 4621571 - 4622254 | 25610.6 |
| yfda | SAMEA3472147_04518 | Not Available | Negative | 4622638 - 4623564 | 34953.9 |
| dini family protein | SAMEA3472147_04519 | Not Available | Positive | 4623959 - 4624207 | 9502.3 |
| peptidase s24/s26a/s26b | SAMEA3472147_04520 | Not Available | Positive | 4624204 - 4624641 | 16220.1 |
| dna-directed dna polymerase | SAMEA3472147_04521 | Not Available | Positive | 4624641 - 4625912 | 47584.5 |
| putative crown gall tumor protein virc1 | SAMEA3472147_04522 | Not Available | Positive | 4626108 - 4626734 | 22992.5 |
| uncharacterised protein | SAMEA3472147_04523 | Not Available | Positive | 4626731 - 4627033 | 10809.9 |
| yaga | SAMEA3472147_04524 | Not Available | Negative | 4627568 - 4628914 | 51305.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





