Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfda | SAMEA3472147_04505 | Not Available | Negative | 4612539 - 4613465 | 34964.0 |
| plasmid stable inheritance protein (para family) | SAMEA3472147_04506 | Not Available | Positive | 4613881 - 4614840 | 35497.4 |
| plasmid stable inheritance protein (parb family) | SAMEA3472147_04507 | Not Available | Positive | 4614840 - 4615235 | 14823.7 |
| plasmid stable inheritance protein | SAMEA3472147_04508 | Not Available | Negative | 4615350 - 4615682 | 11881.5 |
| stable plasmid inheritance protein pemi | SAMEA3472147_04509 | Not Available | Negative | 4615684 - 4615941 | 9293.14 |
| caax amino protease | SAMEA3472147_04510 | Not Available | Negative | 4616034 - 4616687 | 24304.1 |
| bacteriocin microcin b17 precursor | SAMEA3472147_04511 | Not Available | Positive | 4617142 - 4617348 | 5955.95 |
| uncharacterised protein | SAMEA3472147_04512 | Not Available | Positive | 4617407 - 4618261 | 32746.5 |
| sagb-type dehydrogenase domain | SAMEA3472147_04513 | Not Available | Positive | 4618263 - 4619081 | 30754.8 |
| ycha | SAMEA3472147_04514 | Not Available | Negative | 4620086 - 4620856 | 28713.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





