Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 4517516 - 4517590 | Not Available |
| uncharacterised protein | SAMEA3472147_04374 | Not Available | Negative | 4519795 - 4520250 | 16712.8 |
| uncharacterised protein | SAMEA3472147_04426 | Not Available | Negative | 4558791 - 4559597 | 31080.5 |
| plasmid sos inhibition protein a | SAMEA3472147_04488 | Not Available | Negative | 4600294 - 4601013 | 27751.0 |
| plasmid sos inhibition protein b | SAMEA3472147_04489 | Not Available | Negative | 4601010 - 4601444 | 15848.8 |
| parb-like nuclease | SAMEA3472147_04490 | Not Available | Negative | 4601513 - 4603477 | 71878.2 |
| conserved putative protein | SAMEA3472147_04491 | Not Available | Negative | 4603542 - 4603775 | 9119.78 |
| single-strand binding protein | SAMEA3472147_04492 | Not Available | Negative | 4603838 - 4604359 | 19125.6 |
| uncharacterised protein | SAMEA3472147_04493 | Not Available | Negative | 4604955 - 4605197 | 9012.7 |
| adenine-specific dna methylase | SAMEA3472147_04494 | Not Available | Negative | 4605197 - 4605760 | 21151.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





