Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose transport system permease xylh | SAMEA3472147_04321 | Not Available | Positive | 4466075 - 4467256 | 41014.4 |
| dna-binding transcriptional activator | SAMEA3472147_04322 | Not Available | Positive | 4467334 - 4468512 | 44871.7 |
| putative endo-beta-n-acetylglucosaminidase | SAMEA3472147_04323 | Not Available | Negative | 4468620 - 4469444 | 30869.3 |
| alpha-amylase | SAMEA3472147_04324 | Not Available | Positive | 4469764 - 4471794 | 75635.4 |
| class i and ii aminotransferase | SAMEA3472147_04325 | Not Available | Positive | 4471972 - 4473225 | 46714.9 |
| electron transport protein ysaa | SAMEA3472147_04326 | Not Available | Negative | 4473376 - 4473849 | 17413.1 |
| dna-binding transcriptional repressor | SAMEA3472147_04327 | Not Available | Negative | 4473951 - 4474799 | 31068.5 |
| 2,3-diketo-l-gulonate reductase | SAMEA3472147_04328 | Not Available | Positive | 4475000 - 4475998 | 36606.9 |
| beta-galactosidase | SAMEA3472147_04329 | Not Available | Positive | 4476010 - 4476474 | 17443.1 |
| uncharacterised protein | SAMEA3472147_04330 | Not Available | Positive | 4476497 - 4477417 | 34465.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





