Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dna topoisomerase | SAMEA3472147_04311 | Not Available | Positive | 4456485 - 4457027 | 19874.0 |
| ribosome maturation factor | SAMEA3472147_04312 | Not Available | Positive | 4457032 - 4457604 | 20669.8 |
| shikimate dehydrogenase | SAMEA3472147_04313 | Not Available | Positive | 4457609 - 4458427 | 29369.4 |
| transcriptional regulator | SAMEA3472147_04314 | Not Available | Positive | 4458424 - 4458681 | 9993.47 |
| putative transferase | SAMEA3472147_04315 | Not Available | Negative | 4458657 - 4459211 | 20246.3 |
| inner membrane protein | SAMEA3472147_04316 | Not Available | Negative | 4459762 - 4460103 | 12554.0 |
| xylulose kinase | SAMEA3472147_04317 | Not Available | Negative | 4460272 - 4461726 | 52651.3 |
| d-xylose isomerase | SAMEA3472147_04318 | Not Available | Negative | 4461798 - 4463120 | 49721.7 |
| d-xylose transporter subunit xylf | SAMEA3472147_04319 | Not Available | Positive | 4463486 - 4464478 | 35722.1 |
| d-xylose transport atp-binding protein xylg | SAMEA3472147_04320 | Not Available | Positive | 4464556 - 4466097 | 56443.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





