Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | SAMEA3472147_04259 | Not Available | Negative | 4421802 - 4423211 | 51906.6 |
| gntr family transcriptional regulator | SAMEA3472147_04261 | Not Available | Positive | 4425624 - 4426334 | 26940.3 |
| putative sugar isomerase | SAMEA3472147_04262 | Not Available | Positive | 4426342 - 4427322 | 36960.9 |
| major facilitator superfamily protein | SAMEA3472147_04263 | Not Available | Positive | 4427424 - 4428689 | 46382.0 |
| sugar kinase yihv | SAMEA3472147_04264 | Not Available | Negative | 4428811 - 4429074 | 9216.02 |
| phosphatase | SAMEA3472147_04265 | Not Available | Positive | 4429339 - 4429938 | 22781.1 |
| pp_04063 | SAMEA3472147_04266 | Not Available | Positive | 4429932 - 4430804 | Not Available |
| d-tyrosyl-trna(tyr) deacylase | SAMEA3472147_04267 | Not Available | Positive | 4430801 - 4431238 | 15951.0 |
| putative acetyltransferase | SAMEA3472147_04268 | Not Available | Positive | 4431283 - 4432224 | 35339.4 |
| beta-galactosidase | SAMEA3472147_04269 | Not Available | Positive | 4432635 - 4433255 | 23884.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





