Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | SAMEA3472147_04246 | Not Available | Positive | 4409529 - 4410959 | 52611.8 |
| acyltransferase | SAMEA3472147_04247 | Not Available | Negative | 4411000 - 4411932 | 36275.1 |
| uncharacterised protein | SAMEA3472147_04248 | Not Available | Negative | 4412052 - 4412237 | 7134.79 |
| dna polymerase i | SAMEA3472147_04249 | Not Available | Positive | 4412296 - 4415082 | 103152.0 |
| gtp-binding protein | SAMEA3472147_04251 | Not Available | Negative | 4415464 - 4416096 | 23589.3 |
| gtpase activator | SAMEA3472147_04254 | Not Available | Positive | 4416678 - 4417184 | 18955.2 |
| coproporphyrinogen iii oxidase | SAMEA3472147_04255 | Not Available | Positive | 4417373 - 4418746 | 52732.0 |
| small predicted membrane protein | SAMEA3472147_04256 | Not Available | Negative | 4418936 - 4419046 | 3618.45 |
| nitrogen regulation protein nr(i) | SAMEA3472147_04257 | Not Available | Negative | 4419158 - 4420567 | 52227.9 |
| nitrogen regulation protein nr(ii) (two-component system sensor kinase) | SAMEA3472147_04258 | Not Available | Negative | 4420579 - 4421628 | 38558.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





