Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-allose transporter atp-binding protein | SAMEA3472147_04236 | Not Available | Positive | 4401431 - 4402963 | 56690.3 |
| d-allose transporter subunit | SAMEA3472147_04237 | Not Available | Positive | 4402942 - 4403922 | 34275.7 |
| allulose-6-phosphate 3-epimerase | SAMEA3472147_04238 | Not Available | Positive | 4403933 - 4404628 | 26024.6 |
| d-allose kinase | SAMEA3472147_04239 | Not Available | Positive | 4404612 - 4405541 | 33809.8 |
| alkyl sulfatase | SAMEA3472147_04240 | Not Available | Positive | 4405814 - 4405984 | 6267.53 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | SAMEA3472147_04241 | Not Available | Negative | 4406140 - 4406763 | 22864.7 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | SAMEA3472147_04242 | Not Available | Negative | 4406745 - 4407329 | 21572.0 |
| protein yihd | SAMEA3472147_04243 | Not Available | Positive | 4407399 - 4407668 | 10273.5 |
| putative regulatory protein kinase | SAMEA3472147_04244 | Not Available | Positive | 4407745 - 4408731 | 38127.4 |
| thiol:disulfide interchange protein | SAMEA3472147_04245 | Not Available | Positive | 4408748 - 4409374 | 23078.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





