Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine utilization protein | SAMEA3472147_00083 | Not Available | Negative | 79730 - 80431 | 25336.2 |
| ethanolamine utilization protein | SAMEA3472147_00084 | Not Available | Negative | 80406 - 80885 | 17628.8 |
| ethanolamine utilization protein euts | SAMEA3472147_00085 | Not Available | Negative | 80898 - 81233 | 11650.3 |
| nadp-dependent malic enzyme | SAMEA3472147_00086 | Not Available | Negative | 81524 - 83803 | 82448.2 |
| transaldolase a | SAMEA3472147_00087 | Not Available | Positive | 84092 - 85042 | 35660.7 |
| transketolase | SAMEA3472147_00088 | Not Available | Positive | 85062 - 87065 | 73086.7 |
| protein | SAMEA3472147_00089 | Not Available | Negative | 87161 - 88204 | 38719.4 |
| nudix-family hydrolase | SAMEA3472147_00090 | Not Available | Negative | 88330 - 88905 | 21733.9 |
| oxidoreductase | SAMEA3472147_00091 | Not Available | Negative | 88973 - 90952 | 71849.0 |
| nitrate/nitrite sensor protein narq | SAMEA3472147_00092 | Not Available | Positive | 91158 - 92858 | 63616.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





