Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate abc transporter atpase | SAMEA3472147_04216 | Not Available | Positive | 4387372 - 4388160 | 29527.6 |
| phosphonate abc transporter, substrate-binding protein | SAMEA3472147_04217 | Not Available | Positive | 4388185 - 4389201 | 37439.6 |
| phosphonates transport system, permease protein | SAMEA3472147_04218 | Not Available | Positive | 4389307 - 4390086 | 28429.3 |
| phosphonate metabolism transcriptional regulator phnf | SAMEA3472147_04219 | Not Available | Positive | 4390101 - 4390832 | 27837.3 |
| phosphonate metabolism protein | SAMEA3472147_04220 | Not Available | Positive | 4390833 - 4391225 | 14357.2 |
| phosphonate metabolism protein | SAMEA3472147_04221 | Not Available | Positive | 4391282 - 4391866 | 21001.6 |
| carbon-phosphorus lyase complex subunit phni | SAMEA3472147_04222 | Not Available | Positive | 4391866 - 4392315 | 16258.4 |
| carbon-phosphorus lyase complex subunit phni | SAMEA3472147_04223 | Not Available | Positive | 4392454 - 4392930 | 17597.8 |
| phnj protein | SAMEA3472147_04224 | Not Available | Positive | 4392923 - 4393237 | 11355.6 |
| phnj protein | SAMEA3472147_04225 | Not Available | Positive | 4393352 - 4393768 | 15795.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





