Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | SAMEA3472147_04206 | Not Available | Negative | 4378023 - 4378595 | 21922.1 |
| yjhs | SAMEA3472147_04207 | Not Available | Positive | 4378849 - 4380903 | 72325.7 |
| protein of uncharacterised function (duf1378) | SAMEA3472147_04208 | Not Available | Positive | 4381070 - 4381252 | 6679.2 |
| protein of uncharacterised function (duf826) | SAMEA3472147_04209 | Not Available | Positive | 4381288 - 4381542 | 9118.65 |
| uncharacterised protein | SAMEA3472147_04210 | Not Available | Positive | 4381618 - 4381818 | 7495.1 |
| dna modification protein | SAMEA3472147_04211 | Not Available | Positive | 4382627 - 4383157 | 20711.0 |
| putative vimentin | SAMEA3472147_04212 | Not Available | Negative | 4383787 - 4384515 | 27620.7 |
| putative vimentin | SAMEA3472147_04213 | Not Available | Negative | 4384528 - 4385898 | 51431.9 |
| alkylphosphonate uptake protein in phosphonate metabolism | SAMEA3472147_04214 | Not Available | Positive | 4386301 - 4386636 | 12345.7 |
| phnb protein | SAMEA3472147_04215 | Not Available | Positive | 4386796 - 4387239 | 16198.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





