Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative molybdenum transport atp-binding protein (photorepair protein phra) | SAMEA3472147_04176 | Not Available | Positive | 4354438 - 4355910 | 54539.1 |
| udp-galactose-4-epimerase | SAMEA3472147_04177 | Not Available | Positive | 4356172 - 4357188 | 37240.2 |
| galactose-1-phosphate uridylyltransferase | SAMEA3472147_04178 | Not Available | Positive | 4357198 - 4358244 | 39610.6 |
| galactokinase | SAMEA3472147_04179 | Not Available | Positive | 4358248 - 4359396 | 41444.5 |
| aldose 1-epimerase (mutarotase) | SAMEA3472147_04180 | Not Available | Positive | 4359390 - 4360430 | 38236.6 |
| phosphoglyceromutase | SAMEA3472147_04181 | Not Available | Positive | 4360632 - 4361384 | 28556.9 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | SAMEA3472147_04182 | Not Available | Negative | 4361543 - 4362595 | 38011.6 |
| putative homeobox protein | SAMEA3472147_04183 | Not Available | Positive | 4362911 - 4363291 | 12882.7 |
| zinc transporter | SAMEA3472147_04184 | Not Available | Positive | 4363405 - 4364346 | 34680.5 |
| nicotinamide mononucleotide transport protein | SAMEA3472147_04185 | Not Available | Negative | 4364343 - 4365062 | 26997.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





