Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional repressor lldr | SAMEA3472147_04156 | Not Available | Positive | 4336235 - 4337011 | 29167.9 |
| l-lactate dehydrogenase | SAMEA3472147_04157 | Not Available | Positive | 4337008 - 4338198 | 42750.7 |
| putative rna-methyltransferase | SAMEA3472147_04158 | Not Available | Positive | 4338384 - 4338857 | 17658.1 |
| serine acetyltransferase | SAMEA3472147_04159 | Not Available | Negative | 4338910 - 4339731 | 29318.4 |
| glycerol-3-phosphate dehydrogenase | SAMEA3472147_04160 | Not Available | Negative | 4339811 - 4340830 | 36363.8 |
| preprotein translocase subunit secb | SAMEA3472147_04161 | Not Available | Negative | 4340830 - 4341297 | 17292.3 |
| glutaredoxin 3 | SAMEA3472147_04162 | Not Available | Negative | 4341360 - 4341611 | 9138.01 |
| putative rhodanase-like exported protein | SAMEA3472147_04163 | Not Available | Negative | 4341753 - 4342184 | 15583.2 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | SAMEA3472147_04164 | Not Available | Positive | 4342429 - 4343973 | 56170.0 |
| membrane protein yibp | SAMEA3472147_04165 | Not Available | Positive | 4344007 - 4345266 | 46627.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





