Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd-family secretion protein | SAMEA3472147_04146 | Not Available | Negative | 4320968 - 4322104 | 41990.8 |
| inner membrane protein | SAMEA3472147_04147 | Not Available | Negative | 4322107 - 4322469 | 13894.9 |
| pts system subunit iiabc | SAMEA3472147_04148 | Not Available | Positive | 4323006 - 4324919 | 68004.5 |
| mannitol-1-phosphate 5-dehydrogenase | SAMEA3472147_04149 | Not Available | Positive | 4325149 - 4326297 | 41151.5 |
| mannitol operon repressor | SAMEA3472147_04150 | Not Available | Positive | 4326297 - 4326884 | 22019.4 |
| putative cytoplasmic protein | SAMEA3472147_04151 | Not Available | Negative | 4326896 - 4327105 | 7995.76 |
| putative cytoplasmic protein | SAMEA3472147_04152 | Not Available | Positive | 4327390 - 4327752 | 13697.8 |
| putative lipoprotein | SAMEA3472147_04153 | Not Available | Positive | 4328298 - 4328981 | 25526.1 |
| hemagglutinin | SAMEA3472147_04154 | Not Available | Positive | 4329025 - 4334154 | 172034.0 |
| l-lactate permease | SAMEA3472147_04155 | Not Available | Positive | 4334580 - 4336235 | 59189.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





