Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SAMEA3472147_04136 | Not Available | Positive | 4309285 - 4309920 | 24031.1 |
| zinc resistance protein | SAMEA3472147_04137 | Not Available | Negative | 4309922 - 4310347 | 15200.3 |
| uncharacterised protein | SAMEA3472147_04138 | Not Available | Negative | 4310350 - 4310478 | 5042.91 |
| sensor protein zras | SAMEA3472147_04139 | Not Available | Positive | 4310585 - 4311961 | 50462.1 |
| two-component system response regulator | SAMEA3472147_04140 | Not Available | Positive | 4311958 - 4313283 | 48325.3 |
| phosphoribosylglycineamide synthetase | SAMEA3472147_04141 | Not Available | Negative | 4313280 - 4314569 | 45987.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | SAMEA3472147_04142 | Not Available | Negative | 4314581 - 4316170 | 57317.4 |
| selenocysteinyl-trna-specific translation factor | SAMEA3472147_04143 | Not Available | Negative | 4316959 - 4318803 | 68851.5 |
| l-seryl-trna(ser) selenium transferase | SAMEA3472147_04144 | Not Available | Negative | 4318800 - 4320191 | 50640.2 |
| putative glutathione s-transferase | SAMEA3472147_04145 | Not Available | Negative | 4320289 - 4320897 | 22574.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





