Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfur carrier protein this | SAMEA3472147_04125 | Not Available | Negative | 4301148 - 4301348 | 7367.83 |
| thiazole biosynthesis protein thif | SAMEA3472147_04126 | Not Available | Negative | 4301332 - 4302087 | 26952.3 |
| thiamine-phosphate pyrophosphorylase | SAMEA3472147_04127 | Not Available | Negative | 4302080 - 4302715 | 23042.7 |
| thiamine biosynthesis protein thic | SAMEA3472147_04128 | Not Available | Negative | 4302715 - 4304610 | 70890.5 |
| regulator of sigma d | SAMEA3472147_04130 | Not Available | Negative | 4304844 - 4305320 | 18243.9 |
| nadh pyrophosphatase | SAMEA3472147_04131 | Not Available | Positive | 4305415 - 4306188 | 29673.6 |
| uroporphyrinogen decarboxylase | SAMEA3472147_04132 | Not Available | Positive | 4306228 - 4307292 | 39234.3 |
| endonuclease v | SAMEA3472147_04133 | Not Available | Positive | 4307449 - 4308120 | 24673.9 |
| protein of uncharacterised function (duf416) | SAMEA3472147_04134 | Not Available | Positive | 4308163 - 4308753 | 22613.9 |
| dna-binding protein hu-alpha | SAMEA3472147_04135 | Not Available | Positive | 4308940 - 4309212 | 9535.51 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





