Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antitermination protein nusg | SAMEA3472147_04113 | Not Available | Positive | 4286375 - 4286920 | 20532.7 |
| 50s ribosomal protein l11 | SAMEA3472147_04114 | Not Available | Positive | 4287079 - 4287507 | 14876.2 |
| 50s ribosomal protein l1 | SAMEA3472147_04115 | Not Available | Positive | 4287511 - 4288215 | 24731.1 |
| 50s ribosomal protein l10 | SAMEA3472147_04116 | Not Available | Positive | 4288507 - 4289004 | 17712.6 |
| 50s ribosomal protein l7/l12 | SAMEA3472147_04117 | Not Available | Positive | 4289071 - 4289436 | 12295.8 |
| dna-directed rna polymerase subunit beta | SAMEA3472147_04119 | Not Available | Positive | 4289756 - 4293784 | 150641.0 |
| dna-directed rna polymerase subunit beta | SAMEA3472147_04120 | Not Available | Positive | 4293861 - 4298084 | 155169.0 |
| heat shock protein c | SAMEA3472147_04121 | Not Available | Positive | 4298297 - 4298836 | 21132.2 |
| thiamine biosynthesis protein | SAMEA3472147_04123 | Not Available | Negative | 4299246 - 4300379 | 43212.4 |
| thiamin biosynthesis, thiazole moiety | SAMEA3472147_04124 | Not Available | Negative | 4300376 - 4301146 | 26925.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





