Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | SAMEA3472147_04103 | Not Available | Positive | 4277226 - 4278470 | 47025.4 |
| sigma factor-binding protein crl (curlin genes transcriptional activator) | SAMEA3472147_04104 | Not Available | Positive | 4278528 - 4278929 | 15656.7 |
| outer membrane phosphoporin protein e | SAMEA3472147_04105 | Not Available | Negative | 4278968 - 4280023 | 38991.1 |
| gamma-glutamyl kinase | SAMEA3472147_04106 | Not Available | Positive | 4280311 - 4281414 | 39058.9 |
| gamma-glutamyl phosphate reductase | SAMEA3472147_04107 | Not Available | Positive | 4281426 - 4282679 | 44634.7 |
| Trna-thr | Not Available | Not Available | Positive | 4282794 - 4282869 | Not Available |
| lysr family transcriptional regulator | SAMEA3472147_04109 | Not Available | Negative | 4282996 - 4283895 | 33057.0 |
| clavaldehyde dehydrogenase | SAMEA3472147_04110 | Not Available | Positive | 4283994 - 4284716 | 25149.5 |
| uncharacterised protein | SAMEA3472147_04111 | Not Available | Positive | 4284930 - 4285160 | 8157.04 |
| preprotein translocase subunit sece | SAMEA3472147_04112 | Not Available | Positive | 4285990 - 4286373 | 13644.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





