Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar system protein | SAMEA3472147_04093 | Not Available | Negative | 4269058 - 4270797 | 63214.1 |
| chemotaxis protein motb | SAMEA3472147_04094 | Not Available | Positive | 4270898 - 4271527 | 23565.5 |
| dna polymerase iv | SAMEA3472147_04095 | Not Available | Positive | 4271598 - 4272653 | 39500.2 |
| antitoxin of the yafo-yafn toxin-antitoxin system | SAMEA3472147_04096 | Not Available | Positive | 4272705 - 4272998 | 11234.4 |
| toxin yafo | SAMEA3472147_04097 | Not Available | Positive | 4273001 - 4273399 | 15458.7 |
| putative acetyltransferase | SAMEA3472147_04098 | Not Available | Positive | 4273487 - 4273861 | 14532.4 |
| ykfj | SAMEA3472147_04099 | Not Available | Positive | 4274167 - 4274433 | 9850.89 |
| peptide chain release factor h | SAMEA3472147_04100 | Not Available | Positive | 4274402 - 4274713 | 11606.4 |
| aminoacyl-histidine dipeptidase | SAMEA3472147_04101 | Not Available | Negative | 4274958 - 4276415 | 52920.4 |
| xanthine-guanine phosphoribosyltransferase | SAMEA3472147_04102 | Not Available | Positive | 4276676 - 4277134 | 16971.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





