Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inhibitor of vertebrate lysozyme precursor | SAMEA3472147_04083 | Not Available | Positive | 4261151 - 4261624 | 16873.2 |
| acyl-coa dehydrogenase | SAMEA3472147_04084 | Not Available | Negative | 4261667 - 4264111 | 89229.7 |
| phosphoheptose isomerase | SAMEA3472147_04085 | Not Available | Positive | 4264351 - 4264929 | 20816.0 |
| amidotransferase | SAMEA3472147_04086 | Not Available | Positive | 4265135 - 4265902 | 28579.2 |
| membrane protein | SAMEA3472147_04087 | Not Available | Negative | 4265873 - 4266613 | 28022.8 |
| toxin of the yafq-dinj toxin-antitoxin system | SAMEA3472147_04088 | Not Available | Negative | 4266808 - 4267047 | 9372.46 |
| antitoxin of yafq-dinj toxin-antitoxin system | SAMEA3472147_04089 | Not Available | Negative | 4267050 - 4267310 | 9392.3 |
| nlpc/p60 family protein | SAMEA3472147_04090 | Not Available | Positive | 4267496 - 4268269 | 29770.6 |
| hicb family protein | SAMEA3472147_04091 | Not Available | Negative | 4268326 - 4268682 | 13400.8 |
| putative hica | SAMEA3472147_04092 | Not Available | Negative | 4268675 - 4268953 | 10187.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





