Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase is3/is911 family protein | SAMEA3472147_04032 | Not Available | Negative | 4210120 - 4210404 | 10973.0 |
| metal-binding protein | SAMEA3472147_04033 | Not Available | Positive | 4210939 - 4211604 | 24982.5 |
| tyrosine-specific transport protein | SAMEA3472147_04034 | Not Available | Negative | 4211666 - 4212877 | 42808.8 |
| protein | SAMEA3472147_04035 | Not Available | Positive | 4213068 - 4213307 | 8639.2 |
| ferritin | SAMEA3472147_04036 | Not Available | Negative | 4213345 - 4213842 | 19424.9 |
| protein | SAMEA3472147_04037 | Not Available | Negative | 4214013 - 4214336 | 11728.1 |
| protein | SAMEA3472147_04038 | Not Available | Positive | 4214802 - 4215053 | 9123.11 |
| ferritin-like protein 2 | SAMEA3472147_04039 | Not Available | Negative | 4215132 - 4215635 | 18895.6 |
| l-arabinose-binding periplasmic protein | SAMEA3472147_04040 | Not Available | Positive | 4216432 - 4217421 | 35542.9 |
| l-arabinose transporter atp-binding protein | SAMEA3472147_04041 | Not Available | Positive | 4217491 - 4218441 | 34564.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





