Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal-binding protein | SAMEA3472147_04022 | Not Available | Positive | 4194210 - 4194893 | 25635.8 |
| putative type i restriction enzyme hsdr protein | SAMEA3472147_04023 | Not Available | Positive | 4194946 - 4198230 | 124087.0 |
| putative hydrolase | SAMEA3472147_04024 | Not Available | Positive | 4198251 - 4198982 | 28429.9 |
| is1 transposase | SAMEA3472147_04025 | Not Available | Positive | 4199069 - 4199344 | 9922.02 |
| transposase (partial) | SAMEA3472147_04026 | Not Available | Positive | 4199409 - 4199615 | 7796.95 |
| uncharacterized conserved protein | SAMEA3472147_04027 | Not Available | Positive | 4199640 - 4201091 | 56334.1 |
| uncharacterized conserved protein | SAMEA3472147_04028 | Not Available | Positive | 4201084 - 4203126 | 78429.7 |
| putative uvrd/rep helicase-like protein | SAMEA3472147_04029 | Not Available | Positive | 4203313 - 4209048 | 216067.0 |
| hsdr family type i site-specific deoxyribonuclease | SAMEA3472147_04030 | Not Available | Positive | 4209071 - 4209379 | 11833.1 |
| integrase catalytic subunit | SAMEA3472147_04031 | Not Available | Negative | 4209269 - 4210072 | 30804.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





