Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type vi secretion system protein | SAMEA3472147_04002 | Not Available | Negative | 4170973 - 4172052 | 39805.2 |
| putative type vi secretion system protein | SAMEA3472147_04003 | Not Available | Negative | 4172053 - 4172415 | 13676.5 |
| putative type vi secretion system protein | SAMEA3472147_04004 | Not Available | Negative | 4172420 - 4173163 | 26603.9 |
| putative atp-dependent clp proteinase aec27 atp-binding chain, with chaperone activity | SAMEA3472147_04005 | Not Available | Negative | 4173160 - 4175910 | 100199.0 |
| putative type vi secretion system protein | SAMEA3472147_04006 | Not Available | Negative | 4175920 - 4176693 | 29751.3 |
| putative type vi secretion system protein | SAMEA3472147_04007 | Not Available | Negative | 4176698 - 4178044 | 49894.2 |
| putative type vi secretion system protein | SAMEA3472147_04008 | Not Available | Negative | 4178047 - 4178571 | 19283.9 |
| putative type vi secretion system protein | SAMEA3472147_04009 | Not Available | Negative | 4178568 - 4179848 | 47308.0 |
| putative type vi secretion system protein | SAMEA3472147_04010 | Not Available | Negative | 4179865 - 4180914 | 39196.1 |
| putative type vi secretion system protein | SAMEA3472147_04011 | Not Available | Negative | 4180878 - 4182719 | 70847.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





