Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation efflux system protein | SAMEA3472147_03969 | Not Available | Positive | 4135452 - 4135784 | 12266.8 |
| cation efflux system protein | SAMEA3472147_03970 | Not Available | Positive | 4135800 - 4137023 | 44371.5 |
| cation efflux system protein | SAMEA3472147_03971 | Not Available | Positive | 4137035 - 4140178 | 114738.0 |
| phenylalanine transporter | SAMEA3472147_03972 | Not Available | Positive | 4140280 - 4141656 | 50648.3 |
| putative mechanosensitive ion channel protein | SAMEA3472147_03973 | Not Available | Negative | 4141724 - 4142971 | 46605.5 |
| oxygen-insensitive nad(p)h nitroreductase | SAMEA3472147_03974 | Not Available | Negative | 4143079 - 4143732 | 23860.3 |
| putative cytoplasmic protein yjbr | SAMEA3472147_03975 | Not Available | Negative | 4143826 - 4144194 | 14051.1 |
| membrane protein ybdj | SAMEA3472147_03976 | Not Available | Negative | 4144259 - 4144507 | 9403.99 |
| carboxylate-amine ligase | SAMEA3472147_03977 | Not Available | Negative | 4144573 - 4145691 | 41647.5 |
| uncharacterised protein | SAMEA3472147_03978 | Not Available | Positive | 4145766 - 4145957 | 7269.67 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





