Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protease | SAMEA3472147_03959 | Not Available | Negative | 4121456 - 4122940 | 54957.1 |
| outer membrane protease | SAMEA3472147_03960 | Not Available | Negative | 4123127 - 4124080 | 35565.1 |
| porin thermoregulatory protein | SAMEA3472147_03961 | Not Available | Negative | 4124593 - 4125354 | 28992.5 |
| uncharacterised protein | SAMEA3472147_03962 | Not Available | Negative | 4125537 - 4126427 | 33079.5 |
| bacteriophage n4 receptor, outer membrane subunit | SAMEA3472147_03963 | Not Available | Negative | 4126428 - 4128719 | 85809.0 |
| bacteriophage n4 receptor, outer membrane subunit | SAMEA3472147_03964 | Not Available | Negative | 4128858 - 4129400 | 20089.8 |
| bacteriophage n4 adsorption protein b | SAMEA3472147_03965 | Not Available | Negative | 4129387 - 4131624 | 85324.3 |
| sensor kinase cuss | SAMEA3472147_03966 | Not Available | Negative | 4131774 - 4133216 | 53748.2 |
| two-component system response regulator | SAMEA3472147_03967 | Not Available | Negative | 4133206 - 4133889 | 25396.1 |
| copper/silver efflux system outer membrane protein cusc | SAMEA3472147_03968 | Not Available | Positive | 4134046 - 4135428 | 50701.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





