Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimethylamine-n-oxide reductase 2 | SAMEA3472147_03949 | Not Available | Positive | 4110816 - 4113245 | 88987.9 |
| putative methyltransferase | SAMEA3472147_03950 | Not Available | Negative | 4113410 - 4114381 | 37054.6 |
| protein yeco | SAMEA3472147_03951 | Not Available | Negative | 4114378 - 4115121 | 27792.3 |
| inner membrane protein | SAMEA3472147_03952 | Not Available | Negative | 4115162 - 4115557 | 15218.2 |
| conserved protein, upf0759 family | SAMEA3472147_03953 | Not Available | Negative | 4115610 - 4116425 | 31343.5 |
| putative integrase | SAMEA3472147_03954 | Not Available | Negative | 4116391 - 4117677 | 48770.4 |
| exonuclease from phage origin | SAMEA3472147_03955 | Not Available | Negative | 4118023 - 4120257 | 83726.2 |
| uncharacterised protein | SAMEA3472147_03956 | Not Available | Positive | 4120354 - 4120629 | 10216.5 |
| putative prophage protein | SAMEA3472147_03957 | Not Available | Negative | 4120589 - 4120780 | 6785.13 |
| cell division inhibition protein | SAMEA3472147_03958 | Not Available | Negative | 4120777 - 4120965 | 7100.74 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





