Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472147_03939 | Not Available | Negative | 4099509 - 4100261 | 29287.0 |
| putative deoxyguanosinetriphosphate triphosphohydrolase | SAMEA3472147_03940 | Not Available | Negative | 4100230 - 4101738 | 57343.2 |
| flagellar biosynthesis protein flhb | SAMEA3472147_03941 | Not Available | Positive | 4101974 - 4103122 | 42300.5 |
| flagellar biosynthesis protein flha | SAMEA3472147_03942 | Not Available | Positive | 4103221 - 4104849 | 58768.8 |
| flagellar protein flhe | SAMEA3472147_03943 | Not Available | Positive | 4104849 - 4105241 | 14014.3 |
| protein | SAMEA3472147_03944 | Not Available | Negative | 4105363 - 4105851 | 18872.1 |
| arginyl-trna synthetase | SAMEA3472147_03945 | Not Available | Negative | 4106028 - 4107761 | 64706.7 |
| protein yecm | SAMEA3472147_03946 | Not Available | Positive | 4107977 - 4108543 | 21111.0 |
| copper homeostasis protein | SAMEA3472147_03947 | Not Available | Positive | 4108557 - 4109303 | 26656.2 |
| cytochrome c-type protein | SAMEA3472147_03948 | Not Available | Positive | 4109691 - 4110791 | 40221.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





