Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine synthase b | SAMEA3472147_00053 | Not Available | Negative | 52506 - 53417 | 32577.1 |
| sulfate abc transporter, atp-binding protein | SAMEA3472147_00054 | Not Available | Negative | 53551 - 54648 | 41061.4 |
| sulfate abc transporter, permease protein | SAMEA3472147_00055 | Not Available | Negative | 54638 - 55513 | 32565.6 |
| sulfate | SAMEA3472147_00056 | Not Available | Negative | 55513 - 56346 | 30293.6 |
| thiosulfate abc transporter, substrate-binding protein | SAMEA3472147_00057 | Not Available | Negative | 56346 - 57362 | 37658.6 |
| short chain dehydrogenase | SAMEA3472147_00058 | Not Available | Negative | 57520 - 58311 | 27851.6 |
| rpir-family transcriptional regulator | SAMEA3472147_00059 | Not Available | Negative | 58440 - 59297 | 31294.8 |
| n-acetylmuramic acid 6-phosphate etherase | SAMEA3472147_00060 | Not Available | Positive | 59461 - 60357 | 31171.9 |
| n-acetylmuramic acid-specific pts system eiibc component | SAMEA3472147_00061 | Not Available | Positive | 60361 - 61785 | 49820.0 |
| putative peroxidase | SAMEA3472147_00062 | Not Available | Negative | 61965 - 62864 | 33086.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





