Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Holin protein | SAMEA3472147_00737 | Not Available | Negative | 809229 - 809435 | 7394.97 |
| Antitermination protein q | SAMEA3472147_00739 | Not Available | Negative | 811090 - 811413 | 12286.0 |
| Hypothetical protein | SAMEA3472147_02040 | Not Available | Positive | 2173334 - 2174239 | 33875.9 |
| Attl | Not Available | Not Available | Positive | 2173470 - 2173483 | Not Available |
| Hypothetical protein | SAMEA3472147_02041 | Not Available | Positive | 2174247 - 2174822 | 21812.0 |
| Antiterminator protein q | SAMEA3472147_02042 | Not Available | Negative | 2174815 - 2175177 | 13480.5 |
| Hypothetical protein | SAMEA3472147_02043 | Not Available | Negative | 2175195 - 2176184 | 37135.9 |
| Klia-n domain protein | SAMEA3472147_02044 | Not Available | Negative | 2176192 - 2176989 | 29759.8 |
| Holliday junction resolvase | SAMEA3472147_02045 | Not Available | Negative | 2177009 - 2177398 | 14102.0 |
| Lexa dna binding domain protein | SAMEA3472147_02046 | Not Available | Negative | 2177395 - 2177721 | 12093.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





