Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein | SAMEA3472147_03918 | Not Available | Positive | 4076953 - 4077441 | 18788.9 |
| maf-like protein | SAMEA3472147_03919 | Not Available | Positive | 4077450 - 4078043 | 21458.7 |
| ribonuclease g | SAMEA3472147_03920 | Not Available | Positive | 4078033 - 4079502 | 55367.4 |
| membrane protein | SAMEA3472147_03921 | Not Available | Positive | 4079570 - 4083370 | 139015.0 |
| tldd protein | SAMEA3472147_03922 | Not Available | Positive | 4083800 - 4085245 | 51367.2 |
| lysr family transcriptional regulator | SAMEA3472147_03923 | Not Available | Negative | 4085373 - 4086302 | 34518.1 |
| universal stress protein uspc | SAMEA3472147_03924 | Not Available | Negative | 4086617 - 4086838 | 7839.56 |
| transcriptional activator flhd | SAMEA3472147_03925 | Not Available | Positive | 4087618 - 4087968 | 13343.3 |
| flagellar transcriptional activator | SAMEA3472147_03926 | Not Available | Positive | 4087971 - 4088549 | 21567.3 |
| chemotaxis protein mota (motility protein a) | SAMEA3472147_03927 | Not Available | Positive | 4088676 - 4089563 | 31999.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





