Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l11 methyltransferase | SAMEA3472147_03908 | Not Available | Negative | 4065122 - 4066003 | 31878.8 |
| sodium/panthothenate symporter | SAMEA3472147_03909 | Not Available | Negative | 4066015 - 4067466 | 51734.4 |
| inner membrane protein | SAMEA3472147_03910 | Not Available | Negative | 4067456 - 4067698 | 9108.28 |
| acetyl-coa carboxylase | SAMEA3472147_03911 | Not Available | Negative | 4067807 - 4069156 | 49323.7 |
| biotin carboxyl carrier protein of acetyl-coa carboxylase | SAMEA3472147_03912 | Not Available | Negative | 4069167 - 4069637 | 16688.2 |
| initiation of dna replication | SAMEA3472147_03913 | Not Available | Negative | 4070503 - 4071333 | 31470.4 |
| putative zinc-binding dehydrogenase | SAMEA3472147_03914 | Not Available | Negative | 4071370 - 4072344 | 34723.9 |
| putative signal transduction protein | SAMEA3472147_03915 | Not Available | Positive | 4072496 - 4074436 | 73355.7 |
| rod shape-determining protein mreb | SAMEA3472147_03916 | Not Available | Positive | 4074741 - 4075784 | 36954.7 |
| rod shape-determining protein | SAMEA3472147_03917 | Not Available | Positive | 4075850 - 4076953 | 39562.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





