Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multifunctional cca protein | SAMEA3472147_03832 | Not Available | Negative | 4003016 - 4004254 | 46564.9 |
| signal transduction protein | SAMEA3472147_03833 | Not Available | Negative | 4004318 - 4004938 | 23077.7 |
| putative adenylate cyclase | SAMEA3472147_03834 | Not Available | Positive | 4005180 - 4006481 | 48439.8 |
| bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase | SAMEA3472147_03835 | Not Available | Positive | 4006504 - 4009344 | 108434.0 |
| bifunctional protein hlde | SAMEA3472147_03836 | Not Available | Positive | 4009392 - 4010825 | 51053.6 |
| inner membrane protein yqik | SAMEA3472147_03839 | Not Available | Negative | 4011619 - 4013280 | 60621.1 |
| Trna-thr | Not Available | Not Available | Positive | 4051585 - 4051660 | Not Available |
| abc transporter atp-binding protein | SAMEA3472147_03895 | Not Available | Negative | 4051878 - 4052636 | 28564.0 |
| abc transporter permease | SAMEA3472147_03896 | Not Available | Negative | 4052644 - 4053747 | 41487.7 |
| abc transporter permease | SAMEA3472147_03897 | Not Available | Negative | 4053757 - 4054938 | 43263.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





