Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cryptic beta-d-galactosidase subunit alpha | SAMEA3472147_03812 | Not Available | Negative | 3981284 - 3984376 | 117801.0 |
| ebg operon repressor | SAMEA3472147_03813 | Not Available | Negative | 3984560 - 3985543 | 36273.5 |
| putative trna-binding protein | SAMEA3472147_03814 | Not Available | Positive | 3985762 - 3986094 | 12317.1 |
| putrescine--2-oxoglutarate aminotransferase | SAMEA3472147_03815 | Not Available | Negative | 3986136 - 3987626 | 53954.6 |
| aerotaxis receptor protein | SAMEA3472147_03816 | Not Available | Positive | 3987933 - 3988634 | 24548.9 |
| putative transcriptional regulator | SAMEA3472147_03817 | Not Available | Negative | 3988740 - 3989363 | 23371.6 |
| siderophore-interacting protein | SAMEA3472147_03818 | Not Available | Positive | 3989651 - 3990415 | 28840.0 |
| Trna-met | Not Available | Not Available | Positive | 3990469 - 3990544 | Not Available |
| g/u mismatch-specific dna glycosylase | SAMEA3472147_03820 | Not Available | Positive | 3990669 - 3991175 | 18702.5 |
| rna polymerase | SAMEA3472147_03821 | Not Available | Negative | 3991254 - 3993095 | 70211.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





