Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| datp pyrophosphohydrolase | SAMEA3472147_03802 | Not Available | Negative | 3969376 - 3969885 | 19330.9 |
| aspartyl-trna synthetase | SAMEA3472147_03803 | Not Available | Negative | 3969946 - 3971718 | 65873.2 |
| putative isochorismatase | SAMEA3472147_03804 | Not Available | Positive | 3972028 - 3972594 | 20506.4 |
| conserved protein, upf0759 family | SAMEA3472147_03805 | Not Available | Positive | 3972591 - 3972701 | 4359.28 |
| putative phage tail fiber protein | SAMEA3472147_03806 | Not Available | Negative | 3973047 - 3973655 | 22216.0 |
| uncharacterised protein | SAMEA3472147_03807 | Not Available | Negative | 3973934 - 3975478 | 56686.8 |
| glycosyl hydrolase | SAMEA3472147_03808 | Not Available | Negative | 3975770 - 3978121 | 88395.7 |
| uncharacterised protein | SAMEA3472147_03809 | Not Available | Negative | 3978138 - 3979208 | 40078.5 |
| putative amino acid permease | SAMEA3472147_03810 | Not Available | Negative | 3979342 - 3980775 | 52232.8 |
| evolved beta-galactosidase subunit beta | SAMEA3472147_03811 | Not Available | Negative | 3980838 - 3981287 | 17457.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





