Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mutational suppressor of yhjh motility mutation, function uncharacterised | SAMEA3472147_03760 | Not Available | Negative | 3929791 - 3930669 | 32917.7 |
| transporter | SAMEA3472147_03761 | Not Available | Positive | 3931471 - 3932844 | 48111.7 |
| m48b family peptidase | SAMEA3472147_03762 | Not Available | Negative | 3932893 - 3933774 | 31959.3 |
| tail-specific protease | SAMEA3472147_03763 | Not Available | Negative | 3933966 - 3936014 | 76623.3 |
| prop effector protein | SAMEA3472147_03764 | Not Available | Negative | 3936034 - 3936732 | 25835.9 |
| putative signal transduction protein | SAMEA3472147_03765 | Not Available | Negative | 3936829 - 3937380 | 20270.3 |
| inner membrane protein | SAMEA3472147_03766 | Not Available | Positive | 3937456 - 3938739 | 48260.3 |
| mce-like protein | SAMEA3472147_03767 | Not Available | Positive | 3938708 - 3941341 | 94963.0 |
| ribosomal rna small subunit methyltransferase f | SAMEA3472147_03768 | Not Available | Positive | 3941415 - 3942860 | 53436.7 |
| protein | SAMEA3472147_03769 | Not Available | Positive | 3942977 - 3943213 | 8753.26 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





