Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tartrate/fumarate subfamily fe-s type hydro-lyase subunit beta | SAMEA3472147_03749 | Not Available | Positive | 3914338 - 3915984 | 60149.8 |
| putative inner membrane protein | SAMEA3472147_03750 | Not Available | Positive | 3916107 - 3916757 | 24127.2 |
| alpha-galactosidase | SAMEA3472147_03751 | Not Available | Negative | 3916754 - 3918109 | 50589.7 |
| melibiose operon regulatory protein | SAMEA3472147_03752 | Not Available | Positive | 3918392 - 3919300 | 34895.9 |
| biodegradative arginine decarboxylase | SAMEA3472147_03753 | Not Available | Positive | 3919495 - 3921765 | 84630.1 |
| arac family transcriptional regulator | SAMEA3472147_03754 | Not Available | Positive | 3922100 - 3922861 | 29051.4 |
| arginine/agmatine antiporter | SAMEA3472147_03755 | Not Available | Positive | 3922998 - 3924335 | 46845.3 |
| cell division protein | SAMEA3472147_03756 | Not Available | Positive | 3924439 - 3926082 | 61674.6 |
| dna-binding transcriptional regulator basr | SAMEA3472147_03757 | Not Available | Positive | 3926079 - 3926747 | 24988.3 |
| proline/glycine betaine transporter | SAMEA3472147_03759 | Not Available | Negative | 3928025 - 3929527 | 54881.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





