Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 domain-containing protein | SAMEA3472147_03739 | Not Available | Negative | 3900347 - 3900829 | 18977.2 |
| phage protein | SAMEA3472147_03740 | Not Available | Negative | 3901036 - 3904575 | 126723.0 |
| p pilus assembly protein, pilin fima | SAMEA3472147_03741 | Not Available | Positive | 3905354 - 3905866 | 17436.5 |
| putative chaperone | SAMEA3472147_03742 | Not Available | Positive | 3905928 - 3906632 | 26907.4 |
| putative type 1 fimbriae anchoring protein fimd | SAMEA3472147_03743 | Not Available | Positive | 3906660 - 3909197 | 93782.3 |
| acyltransferase with acyl-coa n-acyltransferase domain | SAMEA3472147_03744 | Not Available | Negative | 3909307 - 3909579 | 10481.7 |
| uncharacterized conserved protein | SAMEA3472147_03745 | Not Available | Negative | 3909591 - 3909821 | 8578.37 |
| two-component sensor kinase | SAMEA3472147_03746 | Not Available | Positive | 3910002 - 3911633 | 60550.3 |
| two-component response regulator | SAMEA3472147_03747 | Not Available | Positive | 3911630 - 3912349 | 27489.9 |
| anaerobic c4-dicarboxylate transporter dcub | SAMEA3472147_03748 | Not Available | Positive | 3912920 - 3914260 | 47938.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





