Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iii | SAMEA3472147_03678 | Not Available | Negative | 3831048 - 3833009 | 73269.0 |
| selenophosphate synthetase | SAMEA3472147_03679 | Not Available | Negative | 3833014 - 3834057 | 36675.4 |
| putative nitroreductase | SAMEA3472147_03680 | Not Available | Negative | 3834174 - 3834725 | 20060.1 |
| signal peptide peptidase sppa, 67k type | SAMEA3472147_03681 | Not Available | Positive | 3834886 - 3836742 | 67262.9 |
| l-asparaginase i | SAMEA3472147_03682 | Not Available | Positive | 3836896 - 3837912 | 37129.5 |
| nicotinamidase/pyrazinamidase | SAMEA3472147_03683 | Not Available | Positive | 3837923 - 3838564 | 23429.4 |
| metabolite transport protein | SAMEA3472147_03684 | Not Available | Negative | 3838657 - 3840015 | 50324.9 |
| deor-family transcriptional regulator | SAMEA3472147_03685 | Not Available | Negative | 3840133 - 3840891 | 28252.0 |
| putative sugar reductase | SAMEA3472147_03686 | Not Available | Negative | 3841028 - 3842008 | 36373.0 |
| sugar kinase | SAMEA3472147_03687 | Not Available | Negative | 3842018 - 3842965 | 34167.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





