Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | SAMEA3472147_00033 | Not Available | Negative | 36429 - 37577 | 43458.2 |
| transposase, c-ter fragment, truncated protein | SAMEA3472147_00034 | Not Available | Positive | 37645 - 37932 | 11113.5 |
| glutamyl-trna synthetase | SAMEA3472147_00035 | Not Available | Negative | 38188 - 39603 | 53758.6 |
| Trna-val | Not Available | Not Available | Positive | 39862 - 39937 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 39982 - 40057 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 40104 - 40179 | Not Available |
| Trna-lys | Not Available | Not Available | Positive | 40184 - 40259 | Not Available |
| ybl109 | SAMEA3472147_00040 | Not Available | Positive | 40379 - 40720 | 12563.8 |
| lysr family transcriptional regulator | SAMEA3472147_00041 | Not Available | Negative | 40711 - 41637 | 33905.1 |
| sodium/bile acid symporter family (mazg-like) | SAMEA3472147_00042 | Not Available | Positive | 41727 - 42725 | 36407.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





