Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spheroplast protein y | SAMEA3472147_03658 | Not Available | Negative | 3811189 - 3811674 | 18172.1 |
| succinylglutamate desuccinylase | SAMEA3472147_03659 | Not Available | Negative | 3812004 - 3812972 | 35831.4 |
| n-succinylarginine dihydrolase | SAMEA3472147_03660 | Not Available | Negative | 3812965 - 3814308 | 49336.4 |
| n-succinylglutamate 5-semialdehyde dehydrogenase | SAMEA3472147_03661 | Not Available | Negative | 3814305 - 3815783 | 52980.3 |
| arginine n-succinyltransferase | SAMEA3472147_03662 | Not Available | Negative | 3815780 - 3816814 | 38414.0 |
| succinylornithine transaminase | SAMEA3472147_03663 | Not Available | Negative | 3816811 - 3818031 | 43566.6 |
| exonuclease iii | SAMEA3472147_03664 | Not Available | Positive | 3818477 - 3819283 | 30952.9 |
| inner membrane protein | SAMEA3472147_03665 | Not Available | Positive | 3819450 - 3820160 | 26097.8 |
| putative lipoprotein | SAMEA3472147_03666 | Not Available | Positive | 3820165 - 3820842 | 24216.7 |
| inner membrane protein | SAMEA3472147_03667 | Not Available | Positive | 3820857 - 3821564 | 26154.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





