Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative chitobiose-phosphate hydrolase | SAMEA3472147_03648 | Not Available | Negative | 3802427 - 3803185 | 27834.3 |
| 6-phospho-beta-glucosidase | SAMEA3472147_03649 | Not Available | Negative | 3803198 - 3804550 | 50486.3 |
| chb operon repressor | SAMEA3472147_03650 | Not Available | Negative | 3804654 - 3805493 | 32868.2 |
| n,n'-diacetylchitobiose-specific pts system, eiia component | SAMEA3472147_03651 | Not Available | Negative | 3805504 - 3805854 | 12748.6 |
| n,n'-diacetylchitobiose-specific pts system, eiic component | SAMEA3472147_03652 | Not Available | Negative | 3805905 - 3807263 | 48335.1 |
| pts system n,n'-diacetylchitobiose-specific transporter subunit iib | SAMEA3472147_03653 | Not Available | Negative | 3807348 - 3807668 | 11427.2 |
| osmotically inducible lipoprotein e | SAMEA3472147_03654 | Not Available | Negative | 3807967 - 3808305 | 12021.3 |
| nh3-dependent nad(+) synthetase | SAMEA3472147_03655 | Not Available | Positive | 3808507 - 3809334 | 30668.5 |
| excinuclease cho | SAMEA3472147_03656 | Not Available | Positive | 3809564 - 3810451 | 33742.8 |
| acyl-coa dehydrogenase | SAMEA3472147_03657 | Not Available | Negative | 3810411 - 3810986 | 21666.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





