Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative phosphatase | SAMEA3472147_03638 | Not Available | Positive | 3787059 - 3787283 | 8162.76 |
| putative type iii secreted effector | SAMEA3472147_03639 | Not Available | Negative | 3787420 - 3789828 | 93214.7 |
| putative type iii effector protein | SAMEA3472147_03640 | Not Available | Positive | 3790129 - 3791316 | 46319.2 |
| putative type iii effector protein | SAMEA3472147_03641 | Not Available | Negative | 3791770 - 3794286 | 98096.9 |
| uncharacterised protein | SAMEA3472147_03642 | Not Available | Positive | 3794383 - 3794838 | 17302.4 |
| 6-phosphogluconolactonase | SAMEA3472147_03643 | Not Available | Negative | 3794922 - 3795638 | 26140.5 |
| xylanase | SAMEA3472147_03644 | Not Available | Negative | 3795653 - 3796822 | 42806.4 |
| outer membrane protein yiec | SAMEA3472147_03645 | Not Available | Negative | 3796849 - 3798465 | 60662.2 |
| cell division activator | SAMEA3472147_03646 | Not Available | Negative | 3799673 - 3799936 | 10201.5 |
| catalase hpii | SAMEA3472147_03647 | Not Available | Positive | 3800119 - 3802380 | 84144.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





