Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter permease | SAMEA3472147_03596 | Not Available | Negative | 3742957 - 3743265 | 10722.5 |
| transporter permease | SAMEA3472147_03597 | Not Available | Negative | 3743338 - 3743790 | 16483.0 |
| transporter permease | SAMEA3472147_03598 | Not Available | Negative | 3743790 - 3744839 | 37981.1 |
| dipeptide binding periplasmic protein | SAMEA3472147_03599 | Not Available | Negative | 3744939 - 3746507 | 57031.0 |
| formate dehydrogenase-h subunit alpha | SAMEA3472147_03600 | Not Available | Negative | 3746882 - 3748561 | 62453.9 |
| multidrug resistance outer membrane protein | SAMEA3472147_03602 | Not Available | Negative | 3749227 - 3749589 | 13400.2 |
| multidrug resistance outer membrane protein | SAMEA3472147_03603 | Not Available | Negative | 3749586 - 3750683 | 39708.7 |
| multidrug resistance protein | SAMEA3472147_03604 | Not Available | Negative | 3750947 - 3751999 | 39144.6 |
| multidrug resistance protein | SAMEA3472147_03605 | Not Available | Negative | 3752012 - 3752731 | 26968.8 |
| multidrug resistance protein | SAMEA3472147_03606 | Not Available | Negative | 3752731 - 3753762 | 36924.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





