Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase pentaheme subunit | SAMEA3472147_03586 | Not Available | Positive | 3734007 - 3734573 | 20715.6 |
| cytochrome c-type biogenesis protein | SAMEA3472147_03587 | Not Available | Positive | 3734570 - 3735241 | 24568.8 |
| cytochrome c-type biogenesis protein | SAMEA3472147_03588 | Not Available | Positive | 3735238 - 3736194 | 35044.4 |
| heme lyase subunit nrfe | SAMEA3472147_03589 | Not Available | Positive | 3736310 - 3737932 | 60233.8 |
| formate-dependent nitrite reductase complex subunit | SAMEA3472147_03590 | Not Available | Positive | 3737925 - 3738308 | 14647.0 |
| formate-dependent nitrite reductase complex subunit nrfg | SAMEA3472147_03591 | Not Available | Positive | 3738305 - 3738901 | 22899.6 |
| glutamate/aspartate:proton symporter | SAMEA3472147_03592 | Not Available | Positive | 3739244 - 3740557 | 47166.1 |
| sel1 domain-containing protein | SAMEA3472147_03593 | Not Available | Negative | 3740638 - 3741327 | 25110.5 |
| abc transporter atp-binding protein | SAMEA3472147_03594 | Not Available | Negative | 3741437 - 3742141 | 26419.0 |
| oligopeptide abc transporter | SAMEA3472147_03595 | Not Available | Negative | 3742128 - 3742964 | 31072.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





