Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is1 transposase | SAMEA3472147_03575 | Not Available | Negative | 3721280 - 3721522 | 8786.52 |
| putative eal domain-containing protein | SAMEA3472147_03576 | Not Available | Positive | 3721591 - 3721887 | 11401.9 |
| arac family transcriptional regulator | SAMEA3472147_03577 | Not Available | Negative | 3721890 - 3722213 | 12911.6 |
| putative xanthine/uracil permeases family protein yjcd | SAMEA3472147_03579 | Not Available | Positive | 3723309 - 3724658 | 45714.4 |
| putative sodium/hydrogen exchanger | SAMEA3472147_03580 | Not Available | Positive | 3724809 - 3726458 | 60527.5 |
| pentapeptide repeat-containing protein | SAMEA3472147_03581 | Not Available | Negative | 3726612 - 3727904 | 49133.8 |
| cation/acetate symporter | SAMEA3472147_03582 | Not Available | Negative | 3728082 - 3729731 | 59227.8 |
| inner membrane protein yjch | SAMEA3472147_03583 | Not Available | Negative | 3729728 - 3730042 | 11658.3 |
| acetyl-coenzyme a synthetase | SAMEA3472147_03584 | Not Available | Negative | 3730175 - 3732133 | 72099.5 |
| cytochrome c552 | SAMEA3472147_03585 | Not Available | Positive | 3732526 - 3733962 | 53705.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





