Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VREC0307 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1290844 bp
Thymine Count
1292415 bp
Guanine Count
1324906 bp
Cytosine Count
1324109 bp
Genome Length
5233042 bp
Protein-coding Genes
4642 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3472147_03565 | Not Available | Negative | 3713504 - 3714007 | 19306.9 |
| acid phosphatase/phosphotransferase | SAMEA3472147_03566 | Not Available | Positive | 3714425 - 3714712 | 10115.3 |
| acid phosphatase/phosphotransferase | SAMEA3472147_03567 | Not Available | Positive | 3714736 - 3715137 | 14831.4 |
| thiamin phosphate synthase | SAMEA3472147_03568 | Not Available | Positive | 3715248 - 3715664 | 15656.8 |
| putative cytoplasmic protein yjbr | SAMEA3472147_03569 | Not Available | Positive | 3715668 - 3716024 | 13520.2 |
| excision nuclease subunit a | SAMEA3472147_03570 | Not Available | Negative | 3716059 - 3718881 | 103874.0 |
| single-strand binding protein | SAMEA3472147_03571 | Not Available | Positive | 3719135 - 3719671 | 19006.2 |
| inner membrane protein | SAMEA3472147_03572 | Not Available | Negative | 3719770 - 3720051 | 10327.9 |
| putative eal domain protein regulator | SAMEA3472147_03573 | Not Available | Positive | 3720481 - 3720864 | 14456.8 |
| is1 transposase | SAMEA3472147_03574 | Not Available | Negative | 3720858 - 3721235 | 14931.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





